A subset selection method using Filter and wrapper algorithms based on the nature of the expression values in microarray data sets for gene feature selection

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dc.contributor.author Azad, Tamzid
dc.contributor.author Islam, Md. Mazharul
dc.date.accessioned 2021-09-16T05:04:21Z
dc.date.available 2021-09-16T05:04:21Z
dc.date.issued 2014-11-15
dc.identifier.citation 1. Guangtao Wang & Qinbao Song, ―A Feature Subset Selection Algorithm Automatic Recommendation Method‖, Journal of Artificial Intelligence Research 47 (2013) 1-34, Xi'an Jiaotong University, 2013. 2. Md. Abid Hasan, ―Linear Regression Based Feature Selection for Microarray Data Classification‖,M.Sc Thesis Report, Islamic University of Technology, 2012. 3. Noelia Sánchez-Maroño, Amparo Alonso-Betanzos & María Tombilla-Sanromán, ―Filter Methods for Feature Selection – A Comparative Study‖, Lecture Notes in Computer Science, Volume 4881, 2007, pp 178-187 4. Isabelle Guyon & Andre Elisseeff, “An Introduction to Variable and Feature Selection‖, Journal of Machine Learning Research 3 (2003) 1157-1182, 2003. 5. Laetitia Jourdan et al. ―A Genetic Algorithm for Feature Selection in Data-Mining for Genetics‖, University of Lille, MIC‘2001 - 4th Metaheuristics International Conference, 2001. 6. Jigang Wang et al. ―Neighborhood size selection in the k-nearestneighbor rule using statistical confidence‖, Journal Pattern Recognition Volume 39 Issue 3, Pages 417-423, Elsevier Science Inc. New York, NY, USA March, 2006, Brown University. 7. Chris Ding and Hanchuan Peng, ―Minimum Redundancy Feature Selection from Microarray Gene Expression Data‖, NERSC Division, Lawrence Berkeley National Laboratory, University of California, Berkeley, CA, 94720, USA. 28 8. Hala Helmi, Jonathan M. Garibaldi & Uwe Aickelin, ―Examining the Classification Accuracy of TSVMs with Feature Selectionin Comparison with the GLAD Algorithm‖, 2005. 9. L. S. Oliveira, n. Benahmed, r. Sabourin, f. Bortolozzi & c. Y. Suen, ―Feature Subset Selection Using Genetic Algorithms for Handwritten Digit Recognition‖, 2008. 10. Gianluca Bontempi & Patrick E. Meyer, ―Causal filter selection in microarray data‖, Machine Learning Group, Computer Science Department, Faculty of Sciences ULB, Universit´e Libre de Bruxelles, Brussels, Belgium, 2002. 11. Ron Kohavi and George H. John, ―Wrappers for feature subset selection‖, Data Mining and Visualization, Silicon Graphics, Inc., 2011 N. Shoreline Boulevard, Mountain view, CA 94043, USA, 1997. en_US
dc.identifier.uri http://hdl.handle.net/123456789/1001
dc.description Supervised by Prof. Dr. M. A. Mottalib, Head of the Department, Department of Computer Science and Engineering (CSE), Islamic University of Technology (IUT), Board Bazar, Gazipur-1704, Bangladesh. en_US
dc.description.abstract In the field of micro-array data analysis the crucial first step is gene selection. The process refers to selecting a subset consisting of a few genes which are of genetic significance out of thousands of genes to make the job of the classifier algorithm computationally easy and efficient at the same time. Feature selection plays an important role in classification. The first set of data are gene expression profiles from Acute Lymphoblastic Leukemia (ALL) patients. In this paper an algorithm is proposed for feature subset selection (FFS) which is based on the nature of intensity values in microarray datasets. The proposed method is a combination of a filter and a wrapper algorithm which selects subsets. It is based on two assumptions. Our results demonstrate the importance of feature selection in accurately classifying new samples en_US
dc.language.iso en en_US
dc.publisher Department of Computer Science and Engineering (CSE), Islamic University of Technology (IUT), Board Bazar, Gazipur-1704, Bangladesh en_US
dc.subject Gene expression profiles, Feature selection, Classification, Filter, Wrapper, Weka en_US
dc.title A subset selection method using Filter and wrapper algorithms based on the nature of the expression values in microarray data sets for gene feature selection en_US
dc.type Thesis en_US


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